Recent Advances in Protein Homology Detection Propelled by Inter-Residue Interaction Map Threading
نویسندگان
چکیده
منابع مشابه
Recent Advances in Solving the Protein Threading Problem
The fold recognition methods are promissing tools for capturing the structure of a protein by its amino acid residues sequence but their use is still restricted by the needs of huge computational resources and suitable efficient algorithms as well. In the recent version of FROST (Fold Recognition Oriented Search Tool) package the most efficient algorithm for solving the Protein Threading Proble...
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MOTIVATION The challenge of template-based modeling lies in the recognition of correct templates and generation of accurate sequence-template alignments. Homologous information has proved to be very powerful in detecting remote homologs, as demonstrated by the state-of-the-art profile-based method HHpred. However, HHpred does not fare well when proteins under consideration are low-homology. A p...
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Motivation Protein fold recognition when appropriate, evolutionarily-related, structural templates can be identified is often trivial and may even be viewed as a solved problem. However in cases where no homologous structural templates can be detected, fold recognition is a notoriously difficult problem ( Moult et al., 2014 ). Here we present EigenTHREADER, a novel fold recognition method capab...
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ژورنال
عنوان ژورنال: Frontiers in Molecular Biosciences
سال: 2021
ISSN: 2296-889X
DOI: 10.3389/fmolb.2021.643752